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实例探究 > Efficient genomic profiling of patients: the benefit of systems interoperability

Efficient genomic profiling of patients: the benefit of systems interoperability

技术
  • 分析与建模 - 数据即服务
  • 平台即服务 (PaaS) - 数据管理平台
适用行业
  • 医疗保健和医院
  • 生命科学
适用功能
  • 产品研发
  • 质量保证
用例
  • 预测性维护
  • 质量预测分析
服务
  • 数据科学服务
  • 系统集成
挑战
The challenge in this case study is the need for efficient and effective processing, management, and analysis of omic and phenotypic data in translational research activities. These activities are crucial for characterizing and profiling patients using omic technologies to understand their response to new therapies, stratify patients for trials, or search for new disease biomarkers. The existing in-house software solutions such as tranSMART, while useful, require enhancement and expansion to fully optimize the process of translational research. The data quality and curation is critical to making the right scientific conclusions, and the process of loading omics and clinical sample annotations (metadata) into tranSMART can be time consuming and expensive.
关于客户
The customer in this case study is not explicitly mentioned. However, it can be inferred that the customer is a pharmaceutical or biopharmaceutical company involved in translational research activities. These companies are focused on characterizing and profiling patients using omic technologies to understand their response to new therapies, stratify patients for trials, or search for new disease biomarkers. They are likely to be large organizations with a global presence, given the scale and complexity of the data they are dealing with. They are also likely to be subject to strict regulatory compliance requirements, given the sensitive nature of the patient data they are handling.
解决方案
The solution to this challenge is the integration of Genedata Profiler with tranSMART. Genedata Profiler is an enterprise software platform used by pharma and biopharma companies to optimize the process of translational research. It complements tranSMART by adding sophisticated data processing & curation capabilities to harmonize and standardize data processing workflows. Genedata Profiler uses its own public APIs to load data directly into tranSMART, allowing data to be published with a click of a button in minutes rather than hours. In addition, Genedata Profiler allows augmentation of studies without the need to reload all data for each study. It also provides comprehensive capabilities to ensure patient privacy and maintain the chain of custody of data, goals that are core to regulatory compliance.
运营影响
  • Streamlined the whole data processing, analysis, and management process
  • Reduced the time it takes to perform biomarker studies
  • Enabled scientists to gain new insights into omics data from clinical studies
数量效益
  • Data can be published with a click of a button in minutes rather than hours
  • Allows augmentation of studies without the need to reload all data for each study

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